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About me

Mahnoor Nadeem is a researcher based in Pakistan specializing in bioinformatics and biological sciences, with formal academic training spanning bioinformatics, plant breeding, and genetics. She obtained her Bachelor of Science (Hons.) in Bioinformatics, followed by a Master of Philosophy in Biological Sciences with a specialization in Plant Breeding and Genetics from NIAB‑C/PIEAS. During her postgraduate studies, she attained a CGPA of 3.93/4.00 and was conferred with a Silver Medal in recognition of exceptional academic performance.
Her M.Phil. research comprised a genome‑wide characterization of the basic helix‑loop‑helix (bHLH) transcription factor family, alongside phenotypic and genotypic evaluation of chickpea genotypes under salinity stress conditions. Her primary research interests encompass plant genomics, crop genetic improvement, abiotic stress tolerance, food security, bioinformatics, and the application of machine learning methodologies to address fundamental and applied challenges in biological and food science research.

Mahnoor Nadeem is a researcher specializing in bioinformatics and biological sciences, with robust academic training in computational biology, plant genetics, and agricultural biotechnology. She earned her Bachelor of Science (Hons.) in Bioinformatics, acquiring comprehensive expertise in biological database management, sequence analysis, genomics, characterization of disease-associated genetic variants, protein structure and function analysis, and in silico research methodologies. Her undergraduate thesis involved the computational investigation of missense variants within the PKD1 gene associated with Autosomal Dominant Polycystic Kidney Disease, establishing a strong technical foundation in biomedical bioinformatics and quantitative analysis.
Subsequently, she completed her Master of Philosophy in Biological Sciences, with a specialization in Plant Breeding and Genetics, at NIAB‑C/PIEAS, Pakistan. She graduated with a distinguished CGPA of 3.93/4.00 and was awarded a Silver Medal in recognition of outstanding academic performance. Her postgraduate research, titled “Genome‑wide analysis of the Basic Helix‑Loop‑Helix (bHLH) transcription factor family and phenotypic evaluation of chickpea genotypes under salinity stress,” encompassed gene identification, conserved domain validation, multiple sequence alignment, phylogenetic reconstruction, conserved motif characterization, and data visualization. This work was executed using advanced bioinformatics platforms including HMMER, Pfam, InterPro, SMART, Clustal Omega, MEGA, MEME, TBtools, and iTOL.
Her research portfolio centres on the integration of bioinformatics, genomics, and machine learning to address complex biological challenges across agricultural, food, and health sciences. Her core interests include genetic enhancement of crop species, mechanisms of abiotic stress tolerance, food security, protein functional analysis, and the development of interpretable computational prediction models, all aimed at advancing safer, more sustainable food systems and translational biomedical applications.

Publications resulting from Research
Submitted Manuscript: Functional Plant Biology, Manuscript ID FP25209. Focused on the CLC gene family in potato and their potential functional role in salt stress tolerance.
M.Phil. Thesis: Genome‑wide analysis of the bHLH (Basic helix‑loop‑helix) family and evaluation of chickpea genotypes for salt stress. Research included gene identification, domain validation, sequence alignment, phylogenetic reconstruction, conserved motif analysis, and data visualization using bioinformatics tools.